Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015896575.1_cds_XP_016447918.1_42627
CDS Infomation

[gene=LOC107772976] [db_xref=GeneID:107772976] [protein=calmodulin-binding protein 60 A-like isoform X3] [protein_id=XP_016447918.1] [location=complement(join(4534..5136,5279..5485,6132..6292,8043..8530,8627..8643))] [gbkey=CDS]
Sequence

ATGACTACCATTAAACGGAATTGTGGGAAAGATGTATATGCTTGTGAACTTAGAAGCCTG
AAGCTGAAGTTTTTAGATGTCATCTCTCCCCCGGTATTTACTGGAACTCGCATAGAAGGA
GAGGAATCTAGTTTGAAAGTAGCCCTGGTCGATGCTCATACTGGGCAAGTTGTCTCTAGT
GGTCCTGAATCCTGTGCAAAAGTCGAAATAGTAGTACTCGAGGGAGATTTTGATGGGGAC
GATGGGGACAATTGGACTGCAGAAGAATTCAAGAATAACATTGTGAGAGAAAGGGAAGGA
AAGAAACCTCTCCTTACTGGGGACGCATTTTTGTATCTCAAAGAGGGCATTGGTTGGGTG
AGTGATATTTCATTTACTGATAACTCAAGCTGGACAAGAAGCCGTAAATTCAGGCTAGGG
GCGAGGCTTGCTGATAGCTTTGAAGGAATCAGTGTGCAAGAGGCAAAGACGGAATCCTTC
ATCGTCAGAGATCACCGTGGCGAGTTGTACAAGAAGCACCATCCTCCTTCTCTTTCAGAT
GAAGTATGGAGACTGGAAAAGATTGGCAAGGAAGGAGCTTTCCATCGACGTTTGACCAAG
GAAAGAGTCAACACAGTGAAAGATTTTCTGACTCTCCTCTATCTAGATCCTACAAGGCTT
CGGAATGTTCTTGGGACAGGTATGTCCACCAAAATGTGGGAAGTCACGGTAGAACATGCT
CGAACATGCTTACTTGACAAGAAAGTGTACTTGTACTACTCATCTGGATCTGTACAAAAA
ACTGGTGTGGTTTTTAACATCGTTGGACAAGTGATGGGGCTTCTTCCAGAGTGTCAGTTT
GTTTCTGCTGATAAGTTGTCCGAAACTCAAAAGGATGATGCTCGTAATTTGGTGATTTGT
GCGTTCAGACACTGGGAAGAAGTAGTCTCTTTTGAGGATGAGTTTTCTCTTATGGATTGG
GTTATGCAAATTTCCGCTGTTCAATTCTCCTCAAACTCATCCATGGTAGGCAGTTCAGAT
GCCAATGACAATGTTTTAACTTCCCAGAAGGTTAGCAGAACCGACTATCAGCATTTAAGT
GCATCAACACCTGATATCATGCCATCCTTCTGTTCAATTGCTGGTTTCAGCAGCTTGGAT
GATTATGTCTTGCATGGTATAGACAACATGGATGTTAGGTTTGACCAACCGTTAAATTTT
CCTGGTCAAGATGCCGACTCCTTGATGGTTGATACTGATTCTTTAACTCCACCATTTTGT
GAGGGTGATCATCTGCCTTTCTTCGACACTGACTATTCCCTTCCCAGTCCAAACTTTGCA
CCTTCACCTGATCTACAGTGTGCTGTCAACAGCTTTCTTGCTCGTAGTTCAATTCTTACC
CCAGATAAAGCTCAACGAAGATGGAAGATGCTATTTAGTGTTCTAAGGTGGTTTTCAGTA
AGGAGGATTGTAAACAGAAGAACCATCACATCTTGA

Peptide Sequence

PEP ID

XP_016447918.1
PEP Infomation

PREDICTED: calmodulin-binding protein 60 A-like isoform X3 [Nicotiana tabacum]
Sequence

MTTIKRNCGKDVYACELRSLKLKFLDVISPPVFTGTRIEGEESSLKVALVDAHTGQVVSS
GPESCAKVEIVVLEGDFDGDDGDNWTAEEFKNNIVREREGKKPLLTGDAFLYLKEGIGWV
SDISFTDNSSWTRSRKFRLGARLADSFEGISVQEAKTESFIVRDHRGELYKKHHPPSLSD
EVWRLEKIGKEGAFHRRLTKERVNTVKDFLTLLYLDPTRLRNVLGTGMSTKMWEVTVEHA
RTCLLDKKVYLYYSSGSVQKTGVVFNIVGQVMGLLPECQFVSADKLSETQKDDARNLVIC
AFRHWEEVVSFEDEFSLMDWVMQISAVQFSSNSSMVGSSDANDNVLTSQKVSRTDYQHLS
ASTPDIMPSFCSIAGFSSLDDYVLHGIDNMDVRFDQPLNFPGQDADSLMVDTDSLTPPFC
EGDHLPFFDTDYSLPSPNFAPSPDLQCAVNSFLARSSILTPDKAQRRWKMLFSVLRWFSV
RRIVNRRTITS

Transcript Sequence

Gene sequence data has not been registered.